PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS57585.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 157aa    MW: 17239 Da    PI: 8.5007
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS57585.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.95.5e-11952354
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 +h+e+ErrRR+riN  +++L+++lP+         +Ka+ L +Av+ +++L
  EPS57585.1  9 NSHKEAERRRRKRINAHISTLKSILPNT--------DKASLLGEAVRRVREL 52
                68*************************7........6888888888877766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.693652IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-8952IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.45E-11965IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.7E-111054IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.4E-81258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550214.12E-591155No hitNo description
Gene3DG3DSA:3.30.70.2602.4E-592154No hitNo description
CDDcd048730.0063192153No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
ESKAFAASNS HKEAERRRRK RINAHISTLK SILPNTDKAS LLGEAVRRVR ELNKAAAELL  60
DDETPLKVLF PSEADEVKVS PVEEEEGLVK ATMCCEDRPE MVVDLIKALK SVEAKVVKAE  120
MSTMGGRTKS VLWVQLNVGC ESDVGLATLR RALKGVV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097486.15e-61PREDICTED: transcription factor bHLH30-like
SwissprotQ9S7Y11e-31BH030_ARATH; Transcription factor bHLH30
TrEMBLS8BSM21e-109S8BSM2_9LAMI; Uncharacterized protein (Fragment)
STRINGVIT_18s0001g07410.t012e-48(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72832231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.13e-33bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]